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  1. Li S, Khalid N and Zhao LP. Estimating Haplotype Frequencies and Standard Errors for Multiple Single Nucleotide Polymorphisms. Biostatistics (in press)

  2. Mendez E, Cheng C, Farwell DG, Agoff SN, Futran ND, Weymuller EA, Jr., Maronian NC, Zhao LP and Chen C. Transcriptional Expression Profiles of Oral Squamous Cell Carcinomas. Cancer 95: 1482-1494, 2002.

  3. Zhao LP, Davidov O, Quiaoit F, Hsu L, Holte S. Combined association, segregation and aggregation analysis on case-control family data. Biostatistics 3, 315-329, 2002

  4. Zhao LP. Is statistical significance still significant in the post genome era? ICSA Bulletin, 2002

  5. Xu L, Olson J, Zhao LP. A Regression-Based Method for Genomewide Time Course Study and its Application to Discover Differentially Expressed Genes in an Inducible Huntington's Disease Transgenic Model. Human Molecular Biology, 2002, 11, 1977-1985

  6. Hsu L, Prentice RL, Zhao LP, Li S (2001) Incorporating ages at onset information into the Transmission/Disequilibrium test. Genetic Epidemiology, 21: 347--353.

  7. Bergemann T, Quiaot F, Delrow, Zhao LP. Statistical issues in signal extraction from microarrays. Proceedings of SPIE 2001, 2, 24-33.

  8. Thomas JG, Olson JM, Tapscott SJ, Zhao LP. An efficient and robust statistical modeling approach to analyze genome-wide expression profiles: discovery of differentially expressed genes in human cancers. Genome Research 2001, 11:1227-1236

  9. Zhao LP, Prentice RL, Breeden L. Statistical modeling of large microarray data sets to identify stiumulus-response profiles. Proceeding National of Academic Sciences 2001, 98, 5631-5636

  10. Zhao LP, Zarbl H. Single Nucleotide Polymorphisms and Future Applications (p117-138) in SNP and Microsatellite Genotyping: Markers for genetic analysis, edited by A. Hajeer, J. Worthington and S. John. Eaton Publishing, 2000.

  11. Hsu L, Zhao LP, Aragaki C. A note on a conditional likelihood approach for family-based association studies of candidate genes. Human Heredity 2000; 50: 194-200

  12. Hsu L, Zhao LP, Malone K, Daling J. Genetic anticipation in breast cancer using survival analysis method. Genetic Epidemiology 2000; 18: 17-32.

  13. Hsu L, Aragaki C, Quiaoit F, Wang X, Xu X, Zhao LP. A genome wide scan of SM disease using two newly developed methods. Genetic Epidemiology 1999;17 Suppl 1:S621-6.

  14. Aragaki C, Quiaoit F, Hsu L, Zhao LP. Mapping alcoholism genes using linkage/linkage-disequilibrium analysis. Genetic Epidemiology, 1999;17 Suppl 1:S43-8.

  15. Zhao LP, Aragaki C, Hsu L, Potter J, Elston R, Malone K, Daling J, Prentice R. Integrated designs for gene discovery and characterization. JNCI 1999; 26: 71-80

  16. Hsu L, Prentice RL, Zhao LP, Fan J. On dependence estimation using correlated failure time data from case-control family studies. Biometrika 1999; 86: 743-753

  17. Zhao LP, Prentice RL, Shen F, Hsu L. On the assessment of statistical significance in disease gene discovery. American Journal of Human Genetics 1999; 64: 1739-1753.

  18. Zhao LP, Quiaoit F, Aragaki C, Hsu L. An efficient, robust and unified framework for mapping complex traits (III): Combined linkage/linkage-disequilibrium analysis. American Journal of Medical Genetics 1999; 84: 433-453.

  19. Zarbl H, Aragaki C, Zhao LP. An efficient protocol for rare mutation genotyping in a large population. Genetic Testing 1999; 2: 315-321.

  20. Zhao LP, Hsu L, Holte S, Chen Y, Quiaoit F, Prentice RL. Combined association and aggregation analysis of case-control family data. Biometrika 1998; 85: 229-315.

  21. Zhao LP, Quiaoit F, Aragaki C, Hsu L. An efficient, robust and unified framework for mapping complex traits (II): Multipoint linkage analysis. American Journal of Medical Genetics 1998; 79:48-61.

  22. Zhao LP, Aragaki C, Hsu L, Quiaoit F. Mapping complex traits with single nucleotide polymorphism. American Journal of Human Genetics 1998; 63: 225-240.

  23. Zhao LP, Quiaoit F, Hsu L, Aragaki C. An efficient, robust and unified framework for mapping complex traits (I): Two-point linkage analysis. American Journal of Medical Genetics 1998; 77: 366-383.

  24. Zhao LP, Quiaoit F, Hsu L, Davidov O, Holte S. A population-based family study of a common oligogenic disease (II): The segregation analysis. Genetic Epidemiology 1997; 14: 945-949

  25. Holte S, Quiaoit F, Hsu L, Davidov O, Zhao LP. A population-based family study of a common oligogenic disease (I): Association/Aggregation Analysis. Genetic Epidemiology 1997; 14: 803-807

  26. Zhao LP, Hsu L, Davidov O, Potter J, Elston R, Prentice RL. Population-based family study designs: an interdisciplinary research framework for genetic epidemiology. Genetic Epidemiology 1997; 14: 365-388.

  27. LeMarchand L, Zhao LP, Quiaoit F, Wilken L, Kolonel N. Family history and risk of colorectal cancer. Am J Epidemiology 1996; 144: 1122-1128.

  28. Liu SL, Rodrigo AG, Shankarappa R, Learn GH, Hsu L, Davidov O, Zhao LP, Mullins JI. HIV quasispecies and resampling (letter). Science 1996; 273: 415-416.

  29. Hsu L, Zhao LP. Assessing familial aggregation of age-of-onset using estimating equations; with application to breast cancer. Am J Hum Genet 1996; 58: 1057-1071.

  30. Zhao LP, Grove J. Identifiability of Segregation Parameters Using Estimating Equations. Human Heredity 1995; 45: 286-300.

  31. Zhao LP. Segregation analysis of human pedigrees using estimating equations. Biometrika 1994; 81: 197-209.

  32. Zhao LP, Grove J, Quiaoit F. Empirical evaluation of the sampling plan used in a study of LDL subclass pattern. Genet Epi. 1993; 10: 635-640.

  33. Grove J, Zhao LP, Quiaoit F. Correlation analysis of twin data with repeated measures based on generalized estimating equations. Genet Epi. 1993; 10: 539-544.

  34. Zhao LP, LeMarchand L. An Analytic method for assessing patterns of familial aggregation in case-control studies. Genet Epidemiol 1992; 9: 141-154.

  35. Zhao LP, Grove J, Quiaoit F. A method for assessing patterns of familial resemblance in complex human pedigrees with an application to the nevus count data in Utah Kindreds. Am J Human Genet 1992; 51: 178-190.

  36. Zhao LP, Thompson E, Prentice R. Joint estimation of recombination fraction and interference coefficient in multilocus linkage analysis. Am J Human Genetics l990; 47: 255-65.